| Player | Reason | From | Until | Days | Games missed |
|---|---|---|---|---|---|
 Bernardo | Knock | 22 Aug 2026 | 28 Aug 2026 | 6 | 1 |
 Alexander Prass | Adductor Pain | 21 Aug 2026 | Current | — | 4 |
 Fisnik Asllani | Knee Problems | 7 Aug 2026 | 10 Sept 2026 | 34 | 5 |
 Andrej Kramaric | Groin Surgery | 8 Jul 2026 | 25 Aug 2026 | 48 | 5 |
 Unknown player | Inner Ankle Ligament Tear | 18 Apr 2026 | 31 May 2026 | 43 | 5 |
 Leon Avdullahu | Adductor Injury | 19 Mar 2026 | 1 Apr 2026 | 13 | 2 |
 Luka Đurić | Injury | 12 Mar 2026 | 19 Mar 2026 | 7 | 1 |
 Valentin Gendrey | Ankle Injury | 10 Mar 2026 | 18 Jul 2026 | 130 | 10 |
 Max Moerstedt | ILL | 27 Feb 2026 | 3 Mar 2026 | 4 | 1 |
 Unknown player | ILL | 21 Feb 2026 | 5 Mar 2026 | 12 | 2 |
| Bernardo | Fitness | 20 Feb 2026 | 23 Feb 2026 | 3 | 1 |
 Robin Hranac | ILL | 8 Feb 2026 | 12 Feb 2026 | 4 | 1 |
| Bernardo | Knee Problems | 1 Feb 2026 | 19 Feb 2026 | 18 | 2 |
 Tim Lemperle | Ankle Problems | 1 Feb 2026 | 27 Feb 2026 | 26 | 3 |
| Unknown player | ILL | 27 Jan 2026 | 29 Jan 2026 | 2 | 1 |
| Tim Lemperle | ILL | 24 Jan 2026 | 26 Jan 2026 | 2 | 1 |
 Cole Campbell | Ankle Problems | 13 Jan 2026 | 20 Feb 2026 | 38 | 7 |
 Unknown player | Fitness | 10 Jan 2026 | 2 Feb 2026 | 23 | 5 |
 Adam Hlozek | Calf Injury | 9 Jan 2026 | 20 Apr 2026 | 101 | 16 |
| Adam Hlozek | Fitness | 25 Nov 2025 | 1 Dec 2025 | 6 | 1 |
 Vladimír Coufal | Knee Problems | 27 Oct 2025 | 30 Oct 2025 | 3 | 1 |
 Unknown player | Facial Injury | 24 Oct 2025 | 5 Nov 2025 | 12 | 3 |
 Albian Hajdari | ILL | 27 Sept 2025 | 30 Sept 2025 | 3 | 1 |
 Hennes Behrens | Torn Muscle Fiber | 20 Sept 2025 | 20 Jan 2026 | 122 | 15 |
| Max Moerstedt | ILL | 19 Sept 2025 | 26 Sept 2025 | 7 | 1 |
| Tim Lemperle | Knock | 18 Sept 2025 | 25 Sept 2025 | 7 | 1 |
 Ozan Kabak | Fitness | 1 Sept 2025 | 6 Oct 2025 | 35 | 4 |
| Unknown player | Broken Ankle | 31 Aug 2025 | 9 Jan 2026 | 131 | 14 |
 Wouter Burger | Ankle Injury | 24 Aug 2025 | 12 Sept 2025 | 19 | 1 |
 Koki Machida | Cruciate Ligament Tear | 24 Aug 2025 | 17 Jul 2026 | 327 | 35 |
| Adam Hlozek | Scaphoid Fracture | 13 Aug 2025 | 24 Nov 2025 | 103 | 13 |
| Valentin Gendrey | Broken Ankle | 22 Jul 2025 | 17 Nov 2025 | 118 | 12 |
 Unknown player | Ankle Problems | 8 May 2025 | 18 May 2025 | 10 | 1 |
 Stanley Nsoki | Muscular Problems | 8 May 2025 | 12 May 2025 | 4 | 1 |
| Hennes Behrens | Minor Knock | 1 May 2025 | 7 May 2025 | 6 | 1 |
 Unknown player | ILL | 1 May 2025 | 7 May 2025 | 6 | 1 |
| Unknown player | Fitness | 29 Apr 2025 | 12 May 2025 | 13 | 2 |
 Oliver Baumann | Concussion | 27 Apr 2025 | 8 May 2025 | 11 | 1 |
 Unknown player | Fitness | 25 Apr 2025 | 20 May 2025 | 25 | 4 |
 Unknown player | Fitness | 23 Apr 2025 | 27 Jun 2025 | 65 | 4 |
| Valentin Gendrey | Broken Collarbone | 20 Apr 2025 | 30 Jun 2025 | 71 | 4 |
| Unknown player | Muscle Injury | 10 Mar 2025 | 25 Apr 2025 | 46 | 5 |
| Alexander Prass | Ankle Problems | 9 Mar 2025 | 21 Apr 2025 | 43 | 6 |
 Marius Bülter | Muscular Problems | 1 Mar 2025 | 10 Mar 2025 | 9 | 1 |
| Valentin Gendrey | Fitness | 24 Feb 2025 | 7 Mar 2025 | 11 | 1 |
 Leo Østigård | Thigh Problems | 23 Feb 2025 | 27 Feb 2025 | 4 | 1 |
 Unknown player | ILL | 23 Feb 2025 | — | — | 59 |
| Unknown player | ILL | 22 Feb 2025 | 3 Mar 2025 | 9 | 2 |
| Unknown player | Fitness | 21 Feb 2025 | 24 Feb 2025 | 3 | 0 |
 Unknown player | Tendon Tear | 21 Feb 2025 | 18 May 2025 | 86 | 13 |
 Unknown player | ILL | 21 Feb 2025 | 27 Feb 2025 | 6 | 1 |
 Unknown player | Fitness | 20 Feb 2025 | 28 Feb 2025 | 8 | 1 |
| Adam Hlozek | Ankle Surgery | 9 Feb 2025 | 31 Mar 2025 | 50 | 8 |
| Max Moerstedt | Infection | 2 Feb 2025 | 6 Feb 2025 | 4 | 1 |
 Anton Stach | Knock | 30 Jan 2025 | 15 Feb 2025 | 16 | 3 |
| Unknown player | Knock | 30 Jan 2025 | 6 Feb 2025 | 7 | 2 |
| Andrej Kramaric | Ankle Problems | 30 Jan 2025 | 6 Feb 2025 | 7 | 2 |
| Valentin Gendrey | Adductor Injury | 27 Jan 2025 | 24 Feb 2025 | 28 | 4 |
 Lúkas Petersson | Injury | 26 Jan 2025 | 8 Mar 2025 | 41 | 7 |
 Unknown player | Infection | 26 Jan 2025 | 31 Jan 2025 | 5 | 1 |
| Oliver Baumann | Foot Injury | 24 Jan 2025 | 28 Feb 2025 | 35 | 6 |
 Unknown player | Inflammation In The Knee | 23 Jan 2025 | 15 Feb 2025 | 23 | 5 |
 Grischa Prömel | Injury | 23 Jan 2025 | — | — | 65 |
| Unknown player | Injury | 23 Jan 2025 | — | — | 65 |
| Ozan Kabak | Injury | 23 Jan 2025 | Current | — | 65 |
| Alexander Prass | ILL | 23 Jan 2025 | Current | — | 65 |
| Unknown player | Bruised Ribs | 23 Jan 2025 | 25 Jan 2025 | 2 | 1 |
| Alexander Prass | ILL | 22 Jan 2025 | 31 Jan 2025 | 9 | 2 |
| Marius Bülter | Fitness | 22 Jan 2025 | 24 Jan 2025 | 2 | 1 |
| Unknown player | Hamstring Strain | 18 Jan 2025 | 24 Jan 2025 | 6 | 1 |
| Anton Stach | Stomach Flu | 15 Jan 2025 | 17 Jan 2025 | 2 | 1 |
| Unknown player | Muscle Injury | 15 Jan 2025 | 21 Feb 2025 | 37 | 8 |
| Unknown player | Doubtful | 11 Jan 2025 | 11 Jan 2025 | 0 | 0 |
| Max Moerstedt | Ankle Injury | 19 Dec 2024 | 2 Jan 2025 | 14 | 1 |
 Florian Grillitsch | Fitness | 18 Dec 2024 | 23 Dec 2024 | 5 | 1 |
| Unknown player | Adductor Pain | 15 Dec 2024 | 20 Dec 2024 | 5 | 1 |
| Unknown player | Ankle Injury | 3 Dec 2024 | 20 Feb 2025 | 79 | 15 |
| Marius Bülter | Hamstring Injury | 25 Nov 2024 | 22 Jan 2025 | 58 | 11 |
| Florian Grillitsch | Inner Ligament Injury | 23 Nov 2024 | 18 Dec 2024 | 25 | 7 |
| Stanley Nsoki | Muscular Problems | 7 Nov 2024 | 21 Nov 2024 | 14 | 2 |
 Unknown player | Fitness | 1 Nov 2024 | 30 Nov 2024 | 29 | 5 |
| Unknown player | Calf Injury | 23 Oct 2024 | 23 Apr 2025 | 182 | 32 |
| Marius Bülter | Calf Problems | 22 Oct 2024 | 25 Oct 2024 | 3 | 0 |
 Unknown player | Muscular Problems | 18 Oct 2024 | 23 Oct 2024 | 5 | 1 |
| Unknown player | Torn Muscle Fiber | 3 Oct 2024 | 25 Oct 2024 | 22 | 4 |
| Unknown player | Back Problems | 2 Oct 2024 | 4 Nov 2024 | 33 | 7 |
| Andrej Kramaric | ILL | 24 Sept 2024 | 1 Oct 2024 | 7 | 2 |
| Unknown player | Broken Foot | 20 Sept 2024 | 31 Oct 2024 | 41 | 7 |
| Florian Grillitsch | Flu | 20 Sept 2024 | 23 Sept 2024 | 3 | 1 |
| Unknown player | Thigh Problems | 18 Sept 2024 | 26 Sept 2024 | 8 | 1 |
| Adam Hlozek | Thigh Problems | 13 Sept 2024 | 20 Sept 2024 | 7 | 1 |
| Grischa Prömel | Cruciate Ligament Tear | 3 Sept 2024 | 6 Jul 2025 | 306 | 2 |
| Florian Grillitsch | Hip Problems | 31 Aug 2024 | 2 Sept 2024 | 2 | 1 |
 Unknown player | Injury | 16 Aug 2024 | 15 Nov 2024 | 91 | 14 |
 Tom Bischof | Capsular Injury | 12 Aug 2024 | 13 Sept 2024 | 32 | 3 |
| Unknown player | Knee Surgery | 11 Aug 2024 | 29 Apr 2025 | 261 | 5 |
| Unknown player | Injury | 30 Jul 2024 | 9 Sept 2024 | 41 | 6 |
| Unknown player | Forearm Fracture | 30 Jul 2024 | 2 Oct 2024 | 64 | 8 |
| Stanley Nsoki | Ankle Problems | 16 Jul 2024 | 20 Aug 2024 | 35 | 5 |
| Unknown player | Meniscus Damage | 13 Jul 2024 | 31 Oct 2024 | 110 | 10 |
